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Posted by Raymond Arnold (Member # 11712) on :
 
So later today Nasa will be announcing... something. Right now the official information can be found here. The logline point is:

quote:
WASHINGTON -- NASA will hold a news conference at 2 p.m. EST on Thursday, Dec. 2, to discuss an astrobiology finding that will impact the search for evidence of extraterrestrial life. Astrobiology is the study of the origin, evolution, distribution and future of life in the universe.
Editing out the rest of this because it made it look more exciting than it really was.

[ December 02, 2010, 05:01 PM: Message edited by: Raymond Arnold ]
 
Posted by scholarette (Member # 11540) on :
 
Wow, that would be huge. I will be picking mmy daughter up from school at that time, but something that huge should be replayed later.
 
Posted by Mucus (Member # 9735) on :
 
O-o
New backbone, whoa.
 
Posted by Blayne Bradley (Member # 8565) on :
 
Didnt we already find silicon based life in Russia?
 
Posted by Raymond Arnold (Member # 11712) on :
 
quote:
Originally posted by Blayne Bradley:
Didnt we already find silicon based life in Russia?

After a quick google search, it seems the answer is no. Silicon life has been discussed hypothetically a lot but not actually found.
 
Posted by The White Whale (Member # 6594) on :
 
That's much more exiting that what I was expecting. I was anticipating some new amino acid, or something similar, found on an asteroid or space rock.

A fundamentally different type of life is much, much more exiting.
 
Posted by Nighthawk (Member # 4176) on :
 
I for one welcome our new poison-blooded alien overlords.
 
Posted by Stephan (Member # 7549) on :
 
quote:
Originally posted by Blayne Bradley:
Didnt we already find silicon based life in Russia?

Only in their models.
 
Posted by Stephan (Member # 7549) on :
 
I'm curious if this evolved from life as we know it, crashed here in a meteor, or was an example of something left over from the early Earth.
 
Posted by Herblay (Member # 11834) on :
 
quote:
Originally posted by Stephan:
quote:
Originally posted by Blayne Bradley:
Didnt we already find silicon based life in Russia?

Only in their models.
Their models are implanted with semiconductors / computer chips? They can make you better, stronger, faster.
 
Posted by Raymond Arnold (Member # 11712) on :
 
can't get the Nasa site to work. Somebody let me know if they can find anything conclusive.
 
Posted by scholarette (Member # 11540) on :
 
http://cosmiclog.msnbc.msn.com/_news/2010/12/02/5564852-life-as-we-dont-know-it-on-earth

The bacteria still have phosphorous, but if you give them a super high diet of arsenic, they use it in their DNA. So, lab based, not found in nature. It is a nice proof of concept though.
 
Posted by Lyrhawn (Member # 7039) on :
 
I'm listening now. They're talking about phosphorous.

Edit: Now it's a phosphorous slideshow...and it's actually pretty interesting.
 
Posted by Strider (Member # 1807) on :
 
I'm watching through NASA right now. The first presenter just finished.
 
Posted by BlackBlade (Member # 8376) on :
 
There is indeed a microbe that when phosphorus is removed from its cells and replaced with arsenic it continues to grow.

Nasa Link.
 
Posted by rivka (Member # 4859) on :
 
An awful lot of hype for something that may not stand up. Meh.
 
Posted by Strider (Member # 1807) on :
 
yeah, still very cool. but I'm underwhelmed.
 
Posted by Lyrhawn (Member # 7039) on :
 
Either I haven't gotten to the bad part, or I just didn't understand it yet, but, why is this not as important as the headline states?
 
Posted by Strider (Member # 1807) on :
 
Well, it seems we're dealing with a microbe that has evolved to be able to substitute arsenic for phosophorus and still survive. The hype leading up to this was implying that they had discovered an arsenic based life form. That made me think that had found a life form that had evolved along a completely different path, based on some sort of drastically different DNA structure. From the above article, what was quoted in the OP is completely misleading:

quote:
At their conference today, NASA scientist Felisa Wolfe Simon will announce that they have found a bacteria whose DNA is completely alien to what we know today. Instead of using phosphorus, the bacteria uses arsenic. All life on Earth is made of six components: carbon, hydrogen, nitrogen, oxygen, phosphorus and sulfur. Every being, from the smallest amoeba to the largest whale, share the same life stream. Our DNA blocks are all the same.

But not this one. This one is completely different. Discovered in the poisonous Mono Lake, California, this bacteria is made of arsenic, something that was thought to be completely impossible. While she and other scientists theorized that this could be possible, this is the first discovery. The implications of this discovery are enormous to our understanding of life itself and the possibility of finding beings in other planets that don't have to be like planet Earth.

emphasis mine. granted, there is a line stating that it uses arsenic instead of phosphorus, but I think the general gist of the article, and others that came out before the press conference were very misleading. Though, this is nothing new in the media, especially when dealing with scientific discoveries.
 
Posted by Raymond Arnold (Member # 11712) on :
 
I think the "underwhelmed" factor is going to happen whenever Nasa makes any kind of pre-announcement like that. It's not physically possible for Nasa to say "new discovery related to search for extra-terrestrial life" without it getting overhyped to some degree.

In the internet age, if you don't want people to get disappointed by stuff like this, you need to do the whole announcement at once, methinks.
 
Posted by rivka (Member # 4859) on :
 
The hype is dumb.

As my dad says, science is not conducted in headlines.
 
Posted by fugu13 (Member # 2859) on :
 
I agree the hype is dumb, though this is pretty awesome if it turns out to hold up.

The hype does, however, help get astrobiology funding . . .
 
Posted by Mucus (Member # 9735) on :
 
I don't get the misleading part.
The OP describes a new arsenic based backbone. We got a new arsenic based backbone, eh?
 
Posted by Raymond Arnold (Member # 11712) on :
 
We didn't get arsenic based DNA that evolved completely independently of the rest of life on earth.

But that's okay, it's still pretty cool.
 
Posted by Mucus (Member # 9735) on :
 
I'm only going off the OP here, but it doesn't say anything about evolution (well, except as part of a definition of astrobiology).
 
Posted by Strider (Member # 1807) on :
 
How else would a completely different kind of life whose DNA was completely alien to us come about if not through evolution? (Intelligent Designers need not apply)
 
Posted by Mucus (Member # 9735) on :
 
Let me elaborate, the OP says that the DNA is completely alien to what we know today, it doesn't say a word about it evolving, independently or not.
 
Posted by Strider (Member # 1807) on :
 
True, but I would argue that to say that DNA which is able to substitute one element for another is completely alien is a significant overstatement of the situation already. My further extrapolations (about different evolutionary paths) seem like relatively obvious implications from the initial misleading statements. It seems i'm not alone here at Hatrack or elsewhere.

[ December 02, 2010, 03:32 PM: Message edited by: Strider ]
 
Posted by Mucus (Member # 9735) on :
 
Anyways AFAIK, it is completely alien to what we knew about yesterday. The closest I think we've ever gotten are new amino acids in proteins (rather than DNA) that we didn't know about.

Edit to add: Surely, a new evolutionary path would be way more huge and I probably wouldn't have lead with "New backbone, whoa" [Wink]
 
Posted by Strider (Member # 1807) on :
 
whoops, fixed the compound glitch!

I think you and I just have different definitions of alien. I think foreign, unexpected, previously unknown, all work in that situation. Completely alien to me implies something much more significantly different!

just scrolled up and saw your initial post. [Smile]
 
Posted by The Rabbit (Member # 671) on :
 
Very exciting. I anxious to hear more. For example, I'd like to know if these are otherwise similar to normal bacteria. Do they use the same genetic code. Do they have highly conserved enzymes, like cytochrome C? These questions would be key in answering whether this represents an independent route of abiogenesis, or these bacteria "evolved" from phosphate based bacteria. I'm think the latter is much more likely.

I was also intrigued by the fact that Mono lakes novel chemistry is very recent. That is it's only been isolated from its fresh water intake for 50 years. The idea that this dramatic an adaptation could occur in only 50 years is mind blowing.
 
Posted by fugu13 (Member # 2859) on :
 
Rabbit: these were lab-created from phosphate-based bacteria, not found in the wild. They took phosphate bacteria living in an arsenic-heavy environment, then exposed them to huge quantities of arsenic.
 
Posted by The Rabbit (Member # 671) on :
 
Yes, fugu, I know these bacteria were grown in a laboratory where they were exposed to a phosphate free, arsenic rich environment. It is, however, incorrect to presume that these were "phosphate bacteria" when there were found in the wild. There would have been no way to determine that. The most that can be said, is that when grown in the laboratory, these bacterial were able to use phosphate and arsenic somewhat interchangeably. It is highly unlikely that this characteristic evolved in the laboratory rather than in Mono lake.
 
Posted by fugu13 (Member # 2859) on :
 
Perhaps I should have been more clear. This isn't a new bacterial discovery. They took a 'normal' bacteria (for being an extremophile) in a high arsenic environment and did this; there's nothing particularly unusual about the bacteria otherwise (again, for being an extremophile). It isn't even Archaea.
 
Posted by The Rabbit (Member # 671) on :
 
quote:
Originally posted by fugu13:
Perhaps I should have been more clear. This isn't a new bacterial discovery. They took a 'normal' bacteria (for being an extremophile) in a high arsenic environment and did this; there's nothing particularly unusual about the bacteria otherwise (again, for being an extremophile). It isn't even Archaea.

Where did you get this information. It certainly isn't clear from the NASA press release whether they have done enough molecular level characterization of this bacteria to determine what is and is and is not unusually about it. They call it a gammaproteobateria, but it would not be at all unusual for classification of this nature to be changed dramatically when more detail is learned about he bacteria.

All I was saying is that I would like to hear more detailed information on the biochemistry of the organism. If you have a link to more detailed information on this discovery, please share.
 
Posted by fugu13 (Member # 2859) on :
 
There's a heck of a lot more information available than the NASA press release. I suggest you start with the Science journal article. The bacteria was easily classified by gene sequence comparison and, along with extremely close relations, has been studied quite thoroughly. It exhibits strange characteristics, but only when subsisting on arsenic (which thus are likely not strange for a bacteria subsisting on arsenic, though that could easily change as we find more examples, assuming this all turns out to be replicable).
 
Posted by The Rabbit (Member # 671) on :
 
Can you give me the reference. "Science journal article" ain't it.
 
Posted by The White Whale (Member # 6594) on :
 
http://www.sciencemag.org/content/early/2010/12/01/science.1197258.full.pdf
 
Posted by The Rabbit (Member # 671) on :
 
Thank you White Whale, That's what I was looking for.
 
Posted by fugu13 (Member # 2859) on :
 
My apologies for thinking you were familiar with one of the premier scientific journals in existence.
 
Posted by scholarette (Member # 11540) on :
 
She might have thought you meant a science journal, vs Science journal. Or she might have just been being lazy and letting you find the exact link. [Smile]
 
Posted by Raymond Arnold (Member # 11712) on :
 
Today's XKCD is funny
 
Posted by Lyrhawn (Member # 7039) on :
 
quote:
Originally posted by Raymond Arnold:
Today's XKCD is funny

[ROFL]

Excellent.
 
Posted by BlackBlade (Member # 8376) on :
 
quote:
Originally posted by fugu13:
My apologies for thinking you were familiar with one of the premier scientific journals in existence.

For crying out loud, not you too.
 
Posted by Nighthawk (Member # 4176) on :
 
NASA's revelation was discovered five years old by the USGS

quote:
This arsenic-metabolizing bacterium, SLAS-1, was found in Searles Lake, California. Located in the Mojave Desert, Searles Lake is about ten times saltier and about 70-times more alkaline than seawater and contains arsenic in concentrations that are unusually high (about 4 mM). The bacteria isolated by the USGS scientists were found to not only tolerate the extreme conditions, but to derive energy from metabolizing arsenic.
http://www.sciencemag.org/content/308/5726/1305.abstract

quote:
A Microbial Arsenic Cycle in a Salt-Saturated, Extreme Environment

.../...

Received for publication 8 February 2005.


 
Posted by fugu13 (Member # 2859) on :
 
That's a related discovery (and very interesting in its own right), but not the same discovery. They found that the bacteria in question has a bio-oxidation cycle using arsenic (very unusual), and that this was actually an important part of the bacteria's life cycle in its native environment (at that time a unique discovery).

This discovery is about the organism not just metabolizing arsenic, but using arsenic as part of its internal building blocks, which still function.
 
Posted by The Rabbit (Member # 671) on :
 
quote:
Originally posted by fugu13:
My apologies for thinking you were familiar with one of the premier scientific journals in existence.

My apologies for thinking you were familiar with the concept of a complete reference. [Roll Eyes]
 
Posted by The Rabbit (Member # 671) on :
 
quote:
Originally posted by scholarette:
She might have thought you meant a science journal, vs Science journal. Or she might have just been being lazy and letting you find the exact link. [Smile]

Or I might have simply been asking the information commonly included in a reference, like date, volume, authors that might make is easier for a person living in a developing country to actually get the correct article.
 
Posted by katharina (Member # 827) on :
 
Do your own homework.
 
Posted by The White Whale (Member # 6594) on :
 
quote:
Originally posted by The Rabbit:
Thank you White Whale, That's what I was looking for.

You are welcome.

...desperately trying to keep civility in this thread...
 
Posted by JanitorBlade (Member # 12343) on :
 
katharina: You and Rabbit have a history, you need to remain cognizant of that, and show some restraint.
 
Posted by Mucus (Member # 9735) on :
 
quote:
Originally posted by BlackBlade:
For crying out loud, not you too.

[Smile]

Et tu, fugu?
 
Posted by fugu13 (Member # 2859) on :
 
The article is on the front page of Science, clearly labeled. Simply going to Science's website would make it immediately available to you. Further, so far it has not made it into any of the indexing services (at least as of earlier this morning), so there's no other way to get it.

I suppose I should have assumed you wouldn't do even something that simple, since your previous posts have shown that you did nothing other than look at the NASA press release, engaging in some rather silly speculation instead of taking five seconds on Google to find a source with more technical detail. Then, when I helped fill in the background you were speculating about, you were repeatedly rude. Unsurprisingly, when you then failed to follow up on direct information about where the article could be found in favor of being rude yet again, I got a bit testy.
 
Posted by Raymond Arnold (Member # 11712) on :
 
Seriously dudes, chill.

(That's a gender neutral usage of "dudes")
 
Posted by Strider (Member # 1807) on :
 
I find that people are actually less cordial and more selfish when in cold temperatures. Maybe hatrack needs to warm up instead? (not too warm though)

[ December 03, 2010, 06:41 PM: Message edited by: Strider ]
 
Posted by Raymond Arnold (Member # 11712) on :
 
Hmm. It is December. Mayhap that has something to do with it. (That may just be my geographic bias talking though).
 
Posted by rivka (Member # 4859) on :
 
Raymond, even here in sunny SoCal, I find myself considerably crankier in the winter months. (In my case, this is largely because of my allergies, though.)
 
Posted by King of Men (Member # 6684) on :
 
What are you allergic to that gets worse in winter?
 
Posted by The Rabbit (Member # 671) on :
 
(Post Removed by Janitor Blade.)

(Rabbit, I've never seen you rant before, and I hated seeing you do it now. You were such a wonderful person to meet in real life, of course I would want you to come back, whenever you are ready.

Is everything else OK? I hate to play pop psychologist, but seeing you blow up like that makes me anxious that perhaps you are dealing with things that are very difficult. If you want to talk please don't hesitate to email me. I can't tolerate you attacking posters directly, but I don't blame you for needing to vent, I just want to make sure you are doing alright.

Hope if all is not well, that it will become so. I'm sorry if I had to remove your rant, but it can't serve any positive purpose remaining visible for all to read.)

[ December 03, 2010, 09:56 PM: Message edited by: JanitorBlade ]
 
Posted by Raymond Arnold (Member # 11712) on :
 
@Rabbit: I don't begrudge you the opportunity to vent. I believe you had legitimate reason to be annoyed (not THAT annoyed but apparently there's other stuff going on as well), but I've found in the past that when I posted something like that, I usually regretted it. (Sometimes I get it out of my system by posting it, then deleting it shortly after and hoping nobody notices).

quote:
Originally posted by rivka:
Raymond, even here in sunny SoCal, I find myself considerably crankier in the winter months. (In my case, this is largely because of my allergies, though.)

I had a similar experience in Florida. "Winter" of course is a rather loose term (it's really "the 10 degrees cooler 4 month block that follows Hurricane season"). I got random rashes that at first I thought had to do with my roommate's cat, but went away and then came back next year at the same time.
 
Posted by Mucus (Member # 9735) on :
 
I find this temperature theory highly dubious [Razz]
 
Posted by Xavier (Member # 405) on :
 
Rabbit, don't piss away 10 years of being a hatrack member for one night of indignation.

Just edit/delete your post and don't open this thread again.
 
Posted by JanitorBlade (Member # 12343) on :
 
I'm sorry to do this, but I feel it necessary to lock this thread for now, so that Rabbit does not have to endure any sort of speculation/repercussions regarding her last post. Again, I'm sorry to have to lock a thread that was dealing with such a wonderful scientific development. It's a shame it couldn't be discussed civilly.
 


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